Events Calendar

NL Seminar - Machine Reading of the Biomedical Literature: It's All About Data

Speaker: Gully Burns, USC/ISI

Talk Title: Machine Reading of the Biomedical Literature: It's All About Data

Series: Natural Language Seminar

Abstract: Like most scientific disciplines, cancer biology involves performing experiments and interpreting them. At present, most modeling efforts center on trying to bring together collections of interpretations as 'pathway diagrams' but do not attempt to capture the semantics of supporting experimental data. Here, I will describe a new strategic approach for machine reading of scientific articles based on a generic representation of experimental data with explicit examples within the field of cancer biology. I will also discuss this effort in the context of the Abstract Meaning Representation (AMR) and present an informal generative story for your consideration and feedback.

Biography: Gully Burns develops pragmatic biomedical knowledge engineering systems for scientists that provide directly useful functionality in their everyday use and is based on innovative, cutting edge computer science. He was originally trained as a physicist at Imperial College in London before switching to do a Ph.D. in neuroscience at Oxford. He came to work at USC in 1997, developing the 'NeuroScholar' project in Larry Swanson's lab before joining the Information Sciences Institute in 2006. He is now works as project leader in ISI's Information Integration Group.

Host: Aliya Deri and Kevin Knight

More Info: http://nlg.isi.edu/nl-seminar/

Location: Information Science Institute (ISI) - 6th Flr Conf Rm # 689, Marina Del Rey

Audiences: Everyone Is Invited

Contact: Peter Zamar

Event Link: http://nlg.isi.edu/nl-seminar/